IL_28ZX_081

3D structure

PDB id

28ZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (Kozak_1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGGAUCG*CAUGAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZX|1|S2|G|1604
28ZX|1|S2|G|1605
28ZX|1|S2|G|1606
28ZX|1|S2|A|1607
28ZX|1|S2|U|1608
28ZX|1|S2|C|1609
28ZX|1|S2|G|1610
*
28ZX|1|S2|C|1629
28ZX|1|S2|A|1630
28ZX|1|S2|U|1631
28ZX|1|S2|G|1632
28ZX|1|S2|A|1633
28ZX|1|S2|A|1634
28ZX|1|S2|C|1635

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SF

40S ribosomal protein S5

Chain SS

40S ribosomal protein S18

Chain ST

Small ribosomal subunit protein eS19