IL_28ZX_089
3D structure
- PDB id
- 28ZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 48S PIC with mRNA (Kozak_1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UUA*U(OMU)G
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_28ZX_089 not in the Motif Atlas
- Homologous match to IL_9PN5_227
- Geometric discrepancy: 0.2509
- The information below is about IL_9PN5_227
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_55553.3
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
28ZX|1|S2|U|1729
28ZX|1|S2|U|1730
28ZX|1|S2|A|1731
*
28ZX|1|S2|U|1803
28ZX|1|S2|OMU|1804
28ZX|1|S2|G|1805
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SI
- 40S ribosomal protein S8
- Chain c
- Eukaryotic translation initiation factor 3 subunit C
Coloring options: