3D structure

PDB id
28ZX (explore in PDB, NAKB, or RNA 3D Hub)
Description
human 48S PIC with mRNA (Kozak_1)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
CCGCCG*CCUGGCG
Length
13 nucleotides
Bulged bases
28ZX|1|S2|C|1774, 28ZX|1|S2|U|1775, 28ZX|1|S2|G|1776
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

28ZX|1|S2|C|1752
28ZX|1|S2|C|1753
28ZX|1|S2|G|1754
28ZX|1|S2|C|1755
28ZX|1|S2|C|1756
28ZX|1|S2|G|1757
*
28ZX|1|S2|C|1773
28ZX|1|S2|C|1774
28ZX|1|S2|U|1775
28ZX|1|S2|G|1776
28ZX|1|S2|G|1777
28ZX|1|S2|C|1778
28ZX|1|S2|G|1779

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SG
40S ribosomal protein S6

Coloring options:

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