IL_2AAR_019

3D structure

PDB id

2AAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

UU*GGA

Length

5 nucleotides

Bulged bases

2AAR|1|0|G|742

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2AAR_019 not in the Motif Atlas

Homologous match to IL_7A0S_017

Geometric discrepancy: 0.0971

The information below is about IL_7A0S_017

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

76

Unit IDs

2AAR|1|0|U|715
2AAR|1|0|U|716
*
2AAR|1|0|G|741
2AAR|1|0|G|742
2AAR|1|0|A|743

Current chains

Chain 0

23S ribosomal RNA

Nearby chains