IL_2AAR_050

3D structure

PDB id

2AAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUAAG*CGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2AAR_050 not in the Motif Atlas

Homologous match to IL_7A0S_048

Geometric discrepancy: 0.1289

The information below is about IL_7A0S_048

Detailed Annotation

UAA/GAN

Broad Annotation

UAA/GAN

Motif group

IL_89021.4

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

8

Unit IDs

2AAR|1|0|C|1364
2AAR|1|0|U|1365
2AAR|1|0|A|1366
2AAR|1|0|A|1367
2AAR|1|0|G|1368
*
2AAR|1|0|C|1389
2AAR|1|0|G|1390
2AAR|1|0|A|1391
2AAR|1|0|U|1392
2AAR|1|0|G|1393

Current chains

Chain 0

23S ribosomal RNA

Nearby chains