IL_2AAR_088

3D structure

PDB id

2AAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUGCGUAG*CCUG

Length

12 nucleotides

Bulged bases

2AAR|1|0|U|2096, 2AAR|1|0|A|2097

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2AAR|1|0|C|2091
2AAR|1|0|U|2092
2AAR|1|0|G|2093
2AAR|1|0|C|2094
2AAR|1|0|G|2095
2AAR|1|0|U|2096
2AAR|1|0|A|2097
2AAR|1|0|G|2103
*
2AAR|1|0|C|2161
2AAR|1|0|C|2162
2AAR|1|0|U|2163
2AAR|1|0|G|2164

Current chains

Chain 0

23S ribosomal RNA

Nearby chains