IL_2CSX_002

3D structure

PDB id

2CSX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Aquifex aeolicus methionyl-tRNA synthetase complexed with tRNA(Met)

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CGG*CCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2CSX_002 not in the Motif Atlas

Geometric match to IL_4J50_001

Geometric discrepancy: 0.2236

The information below is about IL_4J50_001

Detailed Annotation

Isolated cWH basepair

Broad Annotation

Isolated cWH basepair

Motif group

IL_10892.1

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

39

Unit IDs

2CSX|1|D|C|3
2CSX|1|D|G|4
2CSX|1|D|G|5
*
2CSX|1|D|C|68
2CSX|1|D|C|69
2CSX|1|D|G|70

Current chains

Chain D

RNA (75-MER)

Nearby chains

Chain B

Methionyl-tRNA synthetase