IL_2DR5_001

3D structure

PDB id

2DR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex structure of CCA adding enzyme with mini-helix lacking CCA

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2DR5_001 not in the Motif Atlas

Geometric match to IL_4WF9_042

Geometric discrepancy: 0.1826

The information below is about IL_4WF9_042

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.5

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

238

Unit IDs

2DR5|1|B|C|5
2DR5|1|B|G|6
2DR5|1|B|G|7
*
2DR5|1|B|C|25
2DR5|1|B|U|26
2DR5|1|B|G|27

Current chains

Chain B

tRNA (32-MER)

Nearby chains

Chain A

CCA-adding enzyme