IL_2F4V_079
3D structure
- PDB id
- 2F4V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S ribosome + designer antibiotic
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- GCCG*CUGGU
- Length
- 9 nucleotides
- Bulged bases
- 2F4V|1|A|U|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2F4V_079 not in the Motif Atlas
- Geometric match to IL_4EYA_008
- Geometric discrepancy: 0.2745
- The information below is about IL_4EYA_008
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_65740.1
- Basepair signature
- cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
2F4V|1|A|G|1058
2F4V|1|A|C|1059
2F4V|1|A|C|1060
2F4V|1|A|G|1061
*
2F4V|1|A|C|1195
2F4V|1|A|U|1196
2F4V|1|A|G|1197
2F4V|1|A|G|1198
2F4V|1|A|U|1199
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S3
- Chain E
- 30S ribosomal protein S5
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S14
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