IL_2J28_002

3D structure

PDB id

2J28 (explore in PDB, NAKB, or RNA 3D Hub)

Description

MODEL OF E. COLI SRP BOUND TO 70S RNCS

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

GC*GAC

Length

5 nucleotides

Bulged bases

2J28|1|8|A|76

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2J28_002 not in the Motif Atlas

Geometric match to IL_9DID_005

Geometric discrepancy: 0.2953

The information below is about IL_9DID_005

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

2J28|1|8|G|30
2J28|1|8|C|31
*
2J28|1|8|G|75
2J28|1|8|A|76
2J28|1|8|C|77

Current chains

Chain 8

4.5S SIGNAL RECOGNITION PARTICLE RNA

Nearby chains