IL_2J28_003
3D structure
- PDB id
- 2J28 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MODEL OF E. COLI SRP BOUND TO 70S RNCS
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- UACCAG*CAA
- Length
- 9 nucleotides
- Bulged bases
- 2J28|1|8|A|42
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2J28_003 not in the Motif Atlas
- Geometric match to IL_3LQX_001
- Geometric discrepancy: 0.1465
- The information below is about IL_3LQX_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_59302.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
2J28|1|8|U|38
2J28|1|8|A|39
2J28|1|8|C|40
2J28|1|8|C|41
2J28|1|8|A|42
2J28|1|8|G|43
*
2J28|1|8|C|66
2J28|1|8|A|67
2J28|1|8|A|68
Current chains
- Chain 8
- 4.5S SIGNAL RECOGNITION PARTICLE RNA
Nearby chains
- Chain 0
- 50S RIBOSOMAL PROTEIN L32
- Chain 9
- SIGNAL RECOGNITION PARTICLE 54
- Chain S
- 50S RIBOSOMAL PROTEIN L22
Coloring options: