IL_2J28_069
3D structure
- PDB id
- 2J28 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MODEL OF E. COLI SRP BOUND TO 70S RNCS
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- ACUAGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 2J28|1|B|G|1992
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2J28_069 not in the Motif Atlas
- Geometric match to IL_5J7L_307
- Geometric discrepancy: 0.0748
- The information below is about IL_5J7L_307
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_76758.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
2J28|1|B|A|1669
2J28|1|B|C|1670
2J28|1|B|U|1671
2J28|1|B|A|1672
2J28|1|B|G|1673
2J28|1|B|G|1674
*
2J28|1|B|C|1990
2J28|1|B|U|1991
2J28|1|B|G|1992
2J28|1|B|U|1993
Current chains
- Chain B
- 23S RIBOSOMAL RNA
Nearby chains
- Chain D
- 50S RIBOSOMAL PROTEIN L3
- Chain K
- 50S RIBOSOMAL PROTEIN L14
Coloring options: