IL_2JL6_004
3D structure
- PDB id
- 2JL6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Insights into translational termination from the structure of RF2 bound to the ribosome (part 2 of 4).This file contains the 50s subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- GGGAG*CGUGGAUC
- Length
- 13 nucleotides
- Bulged bases
- 2JL6|1|A|G|100
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2JL6_004 not in the Motif Atlas
- Geometric match to IL_7RQB_004
- Geometric discrepancy: 0.0969
- The information below is about IL_7RQB_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_45067.2
- Basepair signature
- cWW-tSS-L-tSH-L-R-R-cWW-L
- Number of instances in this motif group
- 18
Unit IDs
2JL6|1|A|G|81
2JL6|1|A|G|82
2JL6|1|A|G|83
2JL6|1|A|A|84
2JL6|1|A|G|85
*
2JL6|1|A|C|97
2JL6|1|A|G|98
2JL6|1|A|U|99
2JL6|1|A|G|100
2JL6|1|A|G|102
2JL6|1|A|A|103
2JL6|1|A|U|104
2JL6|1|A|C|105
Current chains
- Chain A
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 2
- 50S RIBOSOMAL PROTEIN L29
- Chain Y
- 50S RIBOSOMAL PROTEIN L24
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