IL_2JL6_023
3D structure
- PDB id
- 2JL6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Insights into translational termination from the structure of RF2 bound to the ribosome (part 2 of 4).This file contains the 50s subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- GGA*UAACC
- Length
- 8 nucleotides
- Bulged bases
- 2JL6|1|A|G|776, 2JL6|1|A|A|788, 2JL6|1|A|A|789, 2JL6|1|A|C|790
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2JL6_023 not in the Motif Atlas
- Geometric match to IL_7RQB_023
- Geometric discrepancy: 0.072
- The information below is about IL_7RQB_023
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.6
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
2JL6|1|A|G|775
2JL6|1|A|G|776
2JL6|1|A|A|777
*
2JL6|1|A|U|787
2JL6|1|A|A|788
2JL6|1|A|A|789
2JL6|1|A|C|790
2JL6|1|A|C|791
Current chains
- Chain A
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 7
- 50S RIBOSOMAL PROTEIN L34
- Chain D
- 50S RIBOSOMAL PROTEIN L2
- Chain F
- 50S RIBOSOMAL PROTEIN L4
- Chain W
- 50S RIBOSOMAL PROTEIN L22
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