IL_2JL6_055

3D structure

PDB id

2JL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insights into translational termination from the structure of RF2 bound to the ribosome (part 2 of 4).This file contains the 50s subunit.

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

UAG*CAGG

Length

7 nucleotides

Bulged bases

2JL6|1|A|G|1559

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2JL6_055 not in the Motif Atlas

Geometric match to IL_7RQB_056

Geometric discrepancy: 0.2391

The information below is about IL_7RQB_056

Detailed Annotation

Isolated tWW turn

Broad Annotation

No text annotation

Motif group

IL_54997.7

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

2JL6|1|A|U|1433
2JL6|1|A|A|1434
2JL6|1|A|G|1435
*
2JL6|1|A|C|1557
2JL6|1|A|A|1558
2JL6|1|A|G|1559
2JL6|1|A|G|1560

Current chains

Chain A

23S RIBOSOMAL RNA

Nearby chains