IL_2JL6_086
3D structure
- PDB id
- 2JL6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Insights into translational termination from the structure of RF2 bound to the ribosome (part 2 of 4).This file contains the 50s subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- UCC*GG
- Length
- 5 nucleotides
- Bulged bases
- 2JL6|1|A|C|2402
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2JL6_086 not in the Motif Atlas
- Homologous match to IL_7A0S_082
- Geometric discrepancy: 0.4028
- The information below is about IL_7A0S_082
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48076.8
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 43
Unit IDs
2JL6|1|A|U|2401
2JL6|1|A|C|2402
2JL6|1|A|C|2403
*
2JL6|1|A|G|2414
2JL6|1|A|G|2415
Current chains
- Chain A
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 1
- 50S RIBOSOMAL PROTEIN L28
- Chain 6
- 50S RIBOSOMAL PROTEIN L33
- Chain 8
- 50S RIBOSOMAL PROTEIN L35
- Chain P
- 50S RIBOSOMAL PROTEIN L15
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