IL_2JL8_014
3D structure
- PDB id
- 2JL8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Insights into translational termination from the structure of RF2 bound to the ribosome (part 4 of 4). This file contains the 50S subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- GAAC*GAGUGAAAUAGAGC
- Length
- 18 nucleotides
- Bulged bases
- 2JL8|1|A|U|504, 2JL8|1|A|G|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2JL8_014 not in the Motif Atlas
- Geometric match to IL_7RQB_014
- Geometric discrepancy: 0.0695
- The information below is about IL_7RQB_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60992.6
- Basepair signature
- cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L
- Number of instances in this motif group
- 6
Unit IDs
2JL8|1|A|G|481
2JL8|1|A|A|482
2JL8|1|A|A|483
2JL8|1|A|C|484
*
2JL8|1|A|G|496
2JL8|1|A|A|497
2JL8|1|A|G|498
2JL8|1|A|U|499
2JL8|1|A|G|500
2JL8|1|A|A|501
2JL8|1|A|A|502
2JL8|1|A|A|503
2JL8|1|A|U|504
2JL8|1|A|A|505
2JL8|1|A|G|506
2JL8|1|A|A|507
2JL8|1|A|G|508
2JL8|1|A|C|509
Current chains
- Chain A
- 23S RIBOSOMAL RNA
Nearby chains
- Chain W
- 50S RIBOSOMAL PROTEIN L22
- Chain Y
- 50S RIBOSOMAL PROTEIN L24
Coloring options: