IL_2JL8_107
3D structure
- PDB id
- 2JL8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Insights into translational termination from the structure of RF2 bound to the ribosome (part 4 of 4). This file contains the 50S subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- GGAACC*GAAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2JL8_107 not in the Motif Atlas
- Geometric match to IL_5J7L_356
- Geometric discrepancy: 0.121
- The information below is about IL_5J7L_356
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_18472.4
- Basepair signature
- cWW-tSW-R-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
2JL8|1|B|G|23
2JL8|1|B|G|24
2JL8|1|B|A|25
2JL8|1|B|A|26
2JL8|1|B|C|27
2JL8|1|B|C|28
*
2JL8|1|B|G|56
2JL8|1|B|A|57
2JL8|1|B|A|58
2JL8|1|B|A|59
2JL8|1|B|C|60
Current chains
- Chain B
- 5S RIBOSOMAL RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain G
- 50S RIBOSOMAL PROTEIN L5
- Chain S
- 50S RIBOSOMAL PROTEIN L18
Coloring options: