IL_2L1F_089

3D structure

PDB id

2L1F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a conserved retroviral RNA packaging element by NMR spectroscopy and cryo-electron tomography

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

GG*CGGAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2L1F|15|A|G|323
2L1F|15|A|G|324
*
2L1F|15|A|C|337
2L1F|15|A|G|338
2L1F|15|A|G|339
2L1F|15|A|A|340
2L1F|15|A|A|341
2L1F|15|A|C|342

Current chains

Chain A

RNA (65-MER)

Nearby chains