2L1F Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2L1F_001 | 1/A/328:333 | No text annotation | ||
| HL_2L1F_002 | 1/A/362:367 | GNRA | geometric HL_5XTM_002 HL_37824.8 | |
| HL_2L1F_003 | 1/B/728:733 | No text annotation | ||
| HL_2L1F_004 | 1/B/762:767 | GNRA | geometric HL_5XTM_002 HL_37824.8 | |
| HL_2L1F_005 | 2/A/328:333 | No text annotation | ||
| HL_2L1F_006 | 2/A/362:367 | GNRA | geometric HL_4V9F_045 HL_37824.8 | |
| HL_2L1F_007 | 2/B/728:733 | No text annotation | ||
| HL_2L1F_008 | 2/B/762:767 | GNRA | geometric HL_7UZ0_002 HL_37824.8 | |
| HL_2L1F_009 | 3/A/328:333 | No text annotation | ||
| HL_2L1F_010 | 3/A/362:367 | GNRA | geometric HL_7UZ0_002 HL_37824.8 | |
| HL_2L1F_011 | 3/B/728:733 | No text annotation | ||
| HL_2L1F_012 | 3/B/762:767 | GNRA | geometric HL_7UZ0_002 HL_37824.8 | |
| HL_2L1F_013 | 4/A/328:333 | No text annotation | ||
| HL_2L1F_014 | 4/A/362:367 | GNRA | geometric HL_4V9F_045 HL_37824.8 | |
| HL_2L1F_015 | 4/B/728:733 | No text annotation | ||
| HL_2L1F_016 | 4/B/762:767 | GNRA | geometric HL_4V9F_045 HL_37824.8 | |
| HL_2L1F_017 | 5/A/328:333 | No text annotation | ||
| HL_2L1F_018 | 5/A/362:367 | No text annotation | ||
| HL_2L1F_019 | 5/B/728:733 | No text annotation | ||
| HL_2L1F_020 | 5/B/762:767 | GNRA | geometric HL_5XTM_002 HL_37824.8 | |
| HL_2L1F_021 | 6/A/328:333 | No text annotation | ||
| HL_2L1F_022 | 6/A/362:367 | GNRA | geometric HL_4V9F_045 HL_37824.8 | |
| HL_2L1F_023 | 6/B/728:733 | No text annotation | ||
| HL_2L1F_024 | 6/B/762:767 | No text annotation | ||
| HL_2L1F_025 | 7/A/328:333 | No text annotation | ||
| HL_2L1F_026 | 7/A/362:367 | GNRA | geometric HL_7UZ0_002 HL_37824.8 | |
| HL_2L1F_027 | 7/B/728:733 | No text annotation | ||
| HL_2L1F_028 | 7/B/762:767 | GNRA | geometric HL_7UZ0_002 HL_37824.8 | |
| HL_2L1F_029 | 8/A/328:333 | No text annotation | ||
| HL_2L1F_030 | 8/A/362:367 | No text annotation | ||
| HL_2L1F_031 | 8/B/728:733 | No text annotation | ||
| HL_2L1F_032 | 8/B/762:767 | GNRA | geometric HL_4V9F_045 HL_37824.8 | |
| HL_2L1F_033 | 9/A/328:333 | No text annotation | ||
| HL_2L1F_034 | 9/A/362:367 | No text annotation | ||
| HL_2L1F_035 | 9/B/728:733 | No text annotation | ||
| HL_2L1F_036 | 9/B/762:767 | GNRA | geometric HL_4V9F_045 HL_37824.8 | |
| HL_2L1F_037 | 10/A/328:333 | No text annotation | ||
| HL_2L1F_038 | 10/A/362:367 | No text annotation | ||
| HL_2L1F_039 | 10/B/728:733 | No text annotation | ||
| HL_2L1F_040 | 10/B/762:767 | GNRA | geometric HL_4V9F_045 HL_37824.8 | |
| HL_2L1F_041 | 11/A/328:333 | No text annotation | ||
| HL_2L1F_042 | 11/A/362:367 | GNRA | geometric HL_7UZ0_002 HL_37824.8 | |
| HL_2L1F_043 | 11/B/728:733 | No text annotation | ||
| HL_2L1F_044 | 11/B/762:767 | GNRA | geometric HL_5XTM_002 HL_37824.8 | |
| HL_2L1F_045 | 12/A/328:333 | No text annotation | ||
| HL_2L1F_046 | 12/A/362:367 | No text annotation | ||
| HL_2L1F_047 | 12/B/728:733 | No text annotation | ||
| HL_2L1F_048 | 12/B/762:767 | No text annotation | ||
| HL_2L1F_049 | 13/A/328:333 | No text annotation | ||
| HL_2L1F_050 | 13/A/362:367 | GNRA | geometric HL_5XTM_002 HL_37824.8 | |
| HL_2L1F_051 | 13/B/728:733 | No text annotation | ||
| HL_2L1F_052 | 13/B/762:767 | GNRA | geometric HL_7UZ0_002 HL_37824.8 | |
| HL_2L1F_053 | 14/A/328:333 | No text annotation | ||
| HL_2L1F_054 | 14/A/362:367 | GNRA | geometric HL_7UZ0_002 HL_37824.8 | |
| HL_2L1F_055 | 14/B/728:733 | No text annotation | ||
| HL_2L1F_056 | 14/B/762:767 | GNRA | geometric HL_7UZ0_002 HL_37824.8 | |
| HL_2L1F_057 | 15/A/328:333 | No text annotation | ||
| HL_2L1F_058 | 15/A/362:367 | No text annotation | ||
| HL_2L1F_059 | 15/B/728:733 | No text annotation | ||
| HL_2L1F_060 | 15/B/762:767 | GNRA | geometric HL_5XTM_002 HL_37824.8 | |
| HL_2L1F_061 | 16/A/328:333 | No text annotation | ||
| HL_2L1F_062 | 16/A/362:367 | No text annotation | ||
| HL_2L1F_063 | 16/B/728:733 | No text annotation | ||
| HL_2L1F_064 | 16/B/762:767 | No text annotation | ||
| HL_2L1F_065 | 17/A/328:333 | No text annotation | ||
| HL_2L1F_066 | 17/A/362:367 | No text annotation | ||
| HL_2L1F_067 | 17/B/728:733 | No text annotation | ||
| HL_2L1F_068 | 17/B/762:767 | GNRA | geometric HL_5XTM_002 HL_37824.8 | |
| HL_2L1F_069 | 18/A/328:333 | No text annotation | ||
| HL_2L1F_070 | 18/A/362:367 | GNRA | geometric HL_4V9F_045 HL_37824.8 | |
| HL_2L1F_071 | 18/B/728:733 | No text annotation | ||
| HL_2L1F_072 | 18/B/762:767 | GNRA | geometric HL_4V9F_045 HL_37824.8 | |
| HL_2L1F_073 | 19/A/328:333 | No text annotation | ||
| HL_2L1F_074 | 19/A/362:367 | GNRA | geometric HL_5XTM_002 HL_37824.8 | |
| HL_2L1F_075 | 19/B/728:733 | No text annotation | ||
| HL_2L1F_076 | 19/B/762:767 | GNRA | geometric HL_5XTM_001 HL_37824.8 | |
| HL_2L1F_077 | 20/A/328:333 | No text annotation | ||
| HL_2L1F_078 | 20/A/362:367 | GNRA | geometric HL_7UZ0_002 HL_37824.8 | |
| HL_2L1F_079 | 20/B/728:733 | No text annotation | ||
| HL_2L1F_080 | 20/B/762:767 | GNRA | geometric HL_5XTM_002 HL_37824.8 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_2L1F_001 | 1/A/313:316, 1/A/348:349 | No text annotation | ||
| IL_2L1F_002 | 1/A/318:320, 1/A/345:346 | No text annotation | ||
| IL_2L1F_003 | 1/A/323:324, 1/A/337:342 | No text annotation | ||
| IL_2L1F_004 | 1/B/713:716, 1/B/748:749 | No text annotation | ||
| IL_2L1F_005 | 1/B/718:720, 1/B/745:746 | No text annotation | ||
| IL_2L1F_006 | 1/B/723:724, 1/B/737:742 | No text annotation | ||
| IL_2L1F_007 | 2/A/313:316, 2/A/348:349 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_008 | 2/A/318:320, 2/A/345:346 | No text annotation | ||
| IL_2L1F_009 | 2/A/323:324, 2/A/337:342 | No text annotation | ||
| IL_2L1F_010 | 2/B/713:716, 2/B/748:749 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_011 | 2/B/718:720, 2/B/745:746 | No text annotation | ||
| IL_2L1F_012 | 2/B/723:724, 2/B/737:742 | No text annotation | ||
| IL_2L1F_013 | 3/A/313:316, 3/A/348:349 | No text annotation | ||
| IL_2L1F_014 | 3/A/318:320, 3/A/345:346 | No text annotation | ||
| IL_2L1F_015 | 3/A/323:324, 3/A/337:342 | No text annotation | ||
| IL_2L1F_016 | 3/B/713:716, 3/B/748:749 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_017 | 3/B/718:720, 3/B/745:746 | Single bulged U | geometric IL_4C7O_001 IL_89505.4 | |
| IL_2L1F_019 | 3/B/723:724, 3/B/737:742 | No text annotation | ||
| IL_2L1F_020 | 4/A/313:316, 4/A/348:349 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_021 | 4/A/318:320, 4/A/345:346 | No text annotation | ||
| IL_2L1F_022 | 4/A/323:324, 4/A/337:342 | No text annotation | ||
| IL_2L1F_023 | 4/B/713:716, 4/B/748:749 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_024 | 4/B/718:720, 4/B/745:746 | No text annotation | ||
| IL_2L1F_025 | 4/B/723:724, 4/B/737:742 | No text annotation | ||
| IL_2L1F_026 | 5/A/313:316, 5/A/348:349 | No text annotation | ||
| IL_2L1F_027 | 5/A/318:320, 5/A/345:346 | No text annotation | ||
| IL_2L1F_028 | 5/A/323:324, 5/A/337:342 | No text annotation | ||
| IL_2L1F_029 | 5/B/713:716, 5/B/748:749 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_030 | 5/B/718:720, 5/B/745:746 | No text annotation | ||
| IL_2L1F_031 | 5/B/723:724, 5/B/737:742 | No text annotation | ||
| IL_2L1F_032 | 6/A/313:316, 6/A/348:349 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_033 | 6/A/318:320, 6/A/345:346 | No text annotation | ||
| IL_2L1F_034 | 6/A/323:324, 6/A/337:342 | No text annotation | ||
| IL_2L1F_035 | 6/B/713:716, 6/B/748:749 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_036 | 6/B/718:720, 6/B/745:746 | No text annotation | ||
| IL_2L1F_037 | 6/B/723:724, 6/B/737:742 | No text annotation | ||
| IL_2L1F_038 | 7/A/313:316, 7/A/348:349 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_039 | 7/A/318:320, 7/A/345:346 | No text annotation | ||
| IL_2L1F_040 | 7/A/323:324, 7/A/337:342 | No text annotation | ||
| IL_2L1F_041 | 7/B/713:716, 7/B/748:749 | No text annotation | ||
| IL_2L1F_042 | 7/B/718:720, 7/B/745:746 | No text annotation | ||
| IL_2L1F_043 | 7/B/723:724, 7/B/737:742 | No text annotation | ||
| IL_2L1F_044 | 8/A/313:316, 8/A/348:349 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_045 | 8/A/318:320, 8/A/345:346 | No text annotation | ||
| IL_2L1F_046 | 8/A/323:324, 8/A/337:342 | No text annotation | ||
| IL_2L1F_047 | 8/B/713:716, 8/B/748:749 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_048 | 8/B/718:720, 8/B/745:746 | No text annotation | ||
| IL_2L1F_049 | 8/B/723:724, 8/B/737:742 | No text annotation | ||
| IL_2L1F_050 | 9/A/313:316, 9/A/348:349 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_051 | 9/A/318:320, 9/A/345:346 | No text annotation | ||
| IL_2L1F_052 | 9/A/323:324, 9/A/337:342 | No text annotation | ||
| IL_2L1F_053 | 9/B/713:716, 9/B/748:749 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_054 | 9/B/718:720, 9/B/745:746 | No text annotation | ||
| IL_2L1F_055 | 9/B/723:724, 9/B/737:742 | No text annotation | ||
| IL_2L1F_056 | 10/A/313:316, 10/A/348:349 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_057 | 10/A/318:320, 10/A/345:346 | No text annotation | ||
| IL_2L1F_058 | 10/A/323:324, 10/A/337:342 | No text annotation | ||
| IL_2L1F_059 | 10/B/713:716, 10/B/748:749 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_060 | 10/B/718:720, 10/B/745:746 | No text annotation | ||
| IL_2L1F_061 | 10/B/723:724, 10/B/737:742 | No text annotation | ||
| IL_2L1F_062 | 11/A/313:316, 11/A/348:349 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_063 | 11/A/318:320, 11/A/345:346 | No text annotation | ||
| IL_2L1F_064 | 11/A/323:324, 11/A/337:342 | No text annotation | ||
| IL_2L1F_065 | 11/B/713:716, 11/B/748:749 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_066 | 11/B/718:720, 11/B/745:746 | No text annotation | ||
| IL_2L1F_067 | 11/B/723:724, 11/B/737:742 | No text annotation | ||
| IL_2L1F_068 | 12/A/313:316, 12/A/348:349 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_069 | 12/A/318:320, 12/A/345:346 | No text annotation | ||
| IL_2L1F_070 | 12/A/323:324, 12/A/337:342 | No text annotation | ||
| IL_2L1F_071 | 12/B/713:716, 12/B/748:749 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_072 | 12/B/718:720, 12/B/745:746 | No text annotation | ||
| IL_2L1F_073 | 12/B/723:724, 12/B/737:742 | No text annotation | ||
| IL_2L1F_074 | 13/A/313:316, 13/A/348:349 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_075 | 13/A/318:320, 13/A/345:346 | No text annotation | ||
| IL_2L1F_076 | 13/A/323:324, 13/A/337:342 | No text annotation | ||
| IL_2L1F_077 | 13/B/713:716, 13/B/748:749 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_078 | 13/B/718:720, 13/B/745:746 | No text annotation | ||
| IL_2L1F_079 | 13/B/723:724, 13/B/737:742 | No text annotation | ||
| IL_2L1F_080 | 14/A/313:316, 14/A/348:349 | No text annotation | ||
| IL_2L1F_081 | 14/A/318:320, 14/A/345:346 | No text annotation | ||
| IL_2L1F_082 | 14/A/323:324, 14/A/337:342 | No text annotation | ||
| IL_2L1F_083 | 14/B/713:716, 14/B/748:749 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_084 | 14/B/718:720, 14/B/745:746 | No text annotation | ||
| IL_2L1F_085 | 14/B/723:724, 14/B/737:742 | No text annotation | ||
| IL_2L1F_086 | 15/A/313:316, 15/A/348:349 | No text annotation | ||
| IL_2L1F_087 | 15/A/318:320, 15/A/345:346 | No text annotation | ||
| IL_2L1F_089 | 15/A/323:324, 15/A/337:342 | No text annotation | ||
| IL_2L1F_090 | 15/B/713:716, 15/B/748:749 | No text annotation | ||
| IL_2L1F_091 | 15/B/718:720, 15/B/745:746 | No text annotation | ||
| IL_2L1F_092 | 15/B/723:724, 15/B/737:742 | No text annotation | ||
| IL_2L1F_093 | 16/A/313:316, 16/A/348:349 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_094 | 16/A/318:320, 16/A/345:346 | No text annotation | ||
| IL_2L1F_095 | 16/A/323:324, 16/A/337:342 | No text annotation | ||
| IL_2L1F_096 | 16/B/713:716, 16/B/748:749 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_097 | 16/B/718:720, 16/B/745:746 | No text annotation | ||
| IL_2L1F_098 | 16/B/723:724, 16/B/737:742 | No text annotation | ||
| IL_2L1F_099 | 17/A/313:316, 17/A/348:349 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_100 | 17/A/318:320, 17/A/345:346 | No text annotation | ||
| IL_2L1F_101 | 17/A/323:324, 17/A/337:342 | No text annotation | ||
| IL_2L1F_102 | 17/B/713:716, 17/B/748:749 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_103 | 17/B/718:720, 17/B/745:746 | No text annotation | ||
| IL_2L1F_104 | 17/B/723:724, 17/B/737:742 | No text annotation | ||
| IL_2L1F_105 | 18/A/313:316, 18/A/348:349 | No text annotation | ||
| IL_2L1F_106 | 18/A/318:320, 18/A/345:346 | No text annotation | ||
| IL_2L1F_107 | 18/A/323:324, 18/A/337:342 | No text annotation | ||
| IL_2L1F_108 | 18/B/713:716, 18/B/748:749 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_109 | 18/B/718:720, 18/B/745:746 | No text annotation | ||
| IL_2L1F_110 | 18/B/723:724, 18/B/737:742 | No text annotation | ||
| IL_2L1F_111 | 19/A/313:316, 19/A/348:349 | No text annotation | ||
| IL_2L1F_112 | 19/A/318:320, 19/A/345:346 | No text annotation | ||
| IL_2L1F_113 | 19/A/323:324, 19/A/337:342 | No text annotation | ||
| IL_2L1F_114 | 19/B/713:716, 19/B/748:749 | No text annotation | ||
| IL_2L1F_115 | 19/B/718:720, 19/B/745:746 | No text annotation | ||
| IL_2L1F_116 | 19/B/723:724, 19/B/737:742 | No text annotation | ||
| IL_2L1F_117 | 20/A/313:316, 20/A/348:349 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_118 | 20/A/318:320, 20/A/345:346 | No text annotation | ||
| IL_2L1F_119 | 20/A/323:324, 20/A/337:342 | No text annotation | ||
| IL_2L1F_120 | 20/B/713:716, 20/B/748:749 | Other IL | geometric IL_4LCK_008 IL_79895.1 | |
| IL_2L1F_121 | 20/B/718:720, 20/B/745:746 | No text annotation | ||
| IL_2L1F_122 | 20/B/723:724, 20/B/737:742 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_2L1F_018 | Isolated non-canonical cWW pair | ||
| IL_2L1F_088 | Isolated non-canonical cWW pair |
Valid loops
No loops found
Problematic loops
No problematic loops
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