IL_2M4Q_017

3D structure

PDB id

2M4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMR structure of E. coli ribosomela decoding site with apramycin

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

CAC*GAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2M4Q_017 not in the Motif Atlas

Geometric match to IL_8OI5_066

Geometric discrepancy: 0.3957

The information below is about IL_8OI5_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15698.6

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

12

Unit IDs

2M4Q|9|1|C|6
2M4Q|9|1|A|7
2M4Q|9|1|C|8
*
2M4Q|9|1|G|19
2M4Q|9|1|A|20
2M4Q|9|1|A|21
2M4Q|9|1|G|22

Current chains

Chain 1

RNA (27-MER)

Nearby chains