2M4Q Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2M4Q_001 | 1/1/11:16 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_2M4Q_011 | 2/1/11:16 | No text annotation | ||
| HL_2M4Q_012 | 3/1/11:16 | No text annotation | ||
| HL_2M4Q_004 | 4/1/11:16 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_2M4Q_005 | 5/1/11:16 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_2M4Q_006 | 6/1/11:16 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_2M4Q_007 | 7/1/11:16 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_2M4Q_008 | 8/1/11:16 | UNCG | geometric HL_5J7L_171 NA | |
| HL_2M4Q_009 | 9/1/11:16 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_2M4Q_013 | 10/1/11:16 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_2M4Q_002 | No text annotation | ||
| HL_2M4Q_003 | No text annotation | ||
| HL_2M4Q_010 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_2M4Q_001 | 1/1/4:6, 1/1/22:24 | Isolated non-canonical cWW pair | geometric IL_4KNQ_003 IL_01003.5 | |
| IL_2M4Q_002 | 1/1/6:8, 1/1/19:22 | No text annotation | ||
| IL_2M4Q_003 | 2/1/4:8, 2/1/19:24 | No text annotation | ||
| IL_2M4Q_004 | 3/1/4:6, 3/1/22:24 | Isolated non-canonical cWW pair | geometric IL_4KNQ_003 IL_01003.5 | |
| IL_2M4Q_005 | 3/1/6:8, 3/1/19:22 | No text annotation | ||
| IL_2M4Q_006 | 4/1/4:6, 4/1/22:24 | No text annotation | geometric IL_3LA5_001 NA | |
| IL_2M4Q_007 | 4/1/6:8, 4/1/19:22 | No text annotation | ||
| IL_2M4Q_008 | 5/1/4:6, 5/1/22:24 | Isolated non-canonical cWW pair | geometric IL_4J39_001 IL_01003.5 | |
| IL_2M4Q_009 | 5/1/6:8, 5/1/19:22 | No text annotation | ||
| IL_2M4Q_010 | 6/1/4:6, 6/1/22:24 | Isolated non-canonical cWW pair | geometric IL_4JGN_003 IL_01003.5 | |
| IL_2M4Q_011 | 6/1/6:8, 6/1/19:22 | No text annotation | ||
| IL_2M4Q_012 | 7/1/4:6, 7/1/22:24 | Isolated non-canonical cWW pair | geometric IL_4J39_001 IL_01003.5 | |
| IL_2M4Q_013 | 7/1/6:8, 7/1/19:22 | No text annotation | ||
| IL_2M4Q_014 | 8/1/4:6, 8/1/22:24 | Isolated non-canonical cWW pair | geometric IL_4JGN_003 IL_01003.5 | |
| IL_2M4Q_015 | 8/1/6:8, 8/1/19:22 | No text annotation | ||
| IL_2M4Q_016 | 9/1/4:6, 9/1/22:24 | Isolated non-canonical cWW pair | geometric IL_4J39_001 IL_01003.5 | |
| IL_2M4Q_017 | 9/1/6:8, 9/1/19:22 | No text annotation | geometric IL_8OI5_066 IL_15698.6 | |
| IL_2M4Q_018 | 10/1/4:6, 10/1/22:24 | Isolated non-canonical cWW pair | geometric IL_4JGN_003 IL_01003.5 | |
| IL_2M4Q_019 | 10/1/6:8, 10/1/19:22 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_2M4Q_020 | No text annotation | ||
| IL_2M4Q_021 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
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