IL_2NR0_002

3D structure

PDB id

2NR0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

UAC*GA

Length

5 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2NR0_002 not in the Motif Atlas

Geometric match to IL_5VCI_005

Geometric discrepancy: 0.2543

The information below is about IL_5VCI_005

Detailed Annotation

Not an internal loop

Broad Annotation

Not an internal loop

Motif group

IL_64417.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

18

Unit IDs

2NR0|1|H|U|28
2NR0|1|H|A|29
2NR0|1|H|C|30
*
2NR0|1|H|G|40
2NR0|1|H|A|42

Current chains

Chain H

leucyl tRNA

Nearby chains

Chain D

tRNA pseudouridine synthase A