IL_2QBG_016
3D structure
- PDB id
- 2QBG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). This file contains the 50S subunit of the second 70S ribosome, with RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GAAC*GAGUGAAAAAGAAC
- Length
- 18 nucleotides
- Bulged bases
- 2QBG|1|B|A|504, 2QBG|1|B|A|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02359.6
- Basepair signature
- cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
2QBG|1|B|G|481
2QBG|1|B|A|482
2QBG|1|B|A|483
2QBG|1|B|C|484
*
2QBG|1|B|G|496
2QBG|1|B|A|497
2QBG|1|B|G|498
2QBG|1|B|U|499
2QBG|1|B|G|500
2QBG|1|B|A|501
2QBG|1|B|A|502
2QBG|1|B|A|503
2QBG|1|B|A|504
2QBG|1|B|A|505
2QBG|1|B|G|506
2QBG|1|B|A|507
2QBG|1|B|A|508
2QBG|1|B|C|509
Current chains
- Chain B
- 23S rRNA
Nearby chains
- Chain S
- 50S ribosomal protein L22
- Chain U
- 50S ribosomal protein L24
Coloring options: