IL_2QBZ_001

3D structure

PDB id

2QBZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the M-Box Riboswitch Aptamer Domain

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CG*CGAUUG

Length

8 nucleotides

Bulged bases

2QBZ|1|X|U|166

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_11778.1

Basepair signature

cWW-R-R-R-cWW

Number of instances in this motif group

1

Unit IDs

2QBZ|1|X|C|21
2QBZ|1|X|G|22
*
2QBZ|1|X|C|163
2QBZ|1|X|G|164
2QBZ|1|X|A|165
2QBZ|1|X|U|166
2QBZ|1|X|U|167
2QBZ|1|X|G|168

Current chains

Chain X

M-Box RNA, ykoK riboswitch aptamer

Nearby chains