Motif IL_11778.1 Version IL_11778.1 of this group appears in releases 1.0 to 1.18
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-3 | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_2QBZ_001 | 2QBZ | 0 | 1 | X | M-Box RNA, ykoK riboswitch aptamer | C | 21 | G | 22 | * | C | 163 | G | 164 | A | 165 | U | 167 | G | 168 | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CG*CGAUUG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
*GAUU | 1 |
Release history
Release | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 | 1.15 | 1.17 | 1.18 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2013-03-04 | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 | 2014-06-20 | 2014-09-04 | 2014-10-07 |
Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
Parent motif | Common motif instances | Only in IL_11778.1 | Only in the parent motif |
---|---|---|---|
IL_39526.3 Compare | IL_2QBZ_001 | IL_2PN4_002, IL_2NOK_005, IL_2NOK_001 |
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-R-R-R-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: