IL_2QBZ_003

3D structure

PDB id

2QBZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the M-Box Riboswitch Aptamer Domain

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

UGAG*UAAAG

Length

9 nucleotides

Bulged bases

2QBZ|1|X|A|155

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_06808.1

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

1

Unit IDs

2QBZ|1|X|U|28
2QBZ|1|X|G|29
2QBZ|1|X|A|30
2QBZ|1|X|G|31
*
2QBZ|1|X|U|153
2QBZ|1|X|A|154
2QBZ|1|X|A|155
2QBZ|1|X|A|156
2QBZ|1|X|G|157

Current chains

Chain X

M-Box RNA, ykoK riboswitch aptamer

Nearby chains