IL_2R8S_006

3D structure

PDB id

2R8S (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution structure of a specific synthetic FAB bound to P4-P6 RNA ribozyme domain

Experimental method

X-RAY DIFFRACTION

Resolution

1.95 Å

Loop

Sequence

CCAAG*UGCAG

Length

10 nucleotides

Bulged bases

2R8S|1|R|C|255

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

UAA/GAN variation

Broad Annotation

UAA/GAN variation

Motif group

IL_23774.1

Basepair signature

cWW-L-R-L-tHS-cWW

Number of instances in this motif group

11

Unit IDs

2R8S|1|R|C|216
2R8S|1|R|C|217
2R8S|1|R|A|218
2R8S|1|R|A|219
2R8S|1|R|G|220
*
2R8S|1|R|U|253
2R8S|1|R|G|254
2R8S|1|R|C|255
2R8S|1|R|A|256
2R8S|1|R|G|257

Current chains

Chain R

P4-P6 RNA RIBOZYME DOMAIN

Nearby chains