IL_2UXB_046
3D structure
- PDB id
- 2UXB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA GGGU in the context of the Thermus thermophilus 30S subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UGGC*GUCAGCA
- Length
- 11 nucleotides
- Bulged bases
- 2UXB|1|A|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2UXB_046 not in the Motif Atlas
- Geometric match to IL_8C3A_457
- Geometric discrepancy: 0.3634
- The information below is about IL_8C3A_457
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_55620.1
- Basepair signature
- cWW-L-tHS-L-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
2UXB|1|A|U|1056
2UXB|1|A|G|1057
2UXB|1|A|G|1058
2UXB|1|A|C|1059
*
2UXB|1|A|G|1198
2UXB|1|A|U|1199
2UXB|1|A|C|1200
2UXB|1|A|A|1201
2UXB|1|A|G|1202
2UXB|1|A|C|1203
2UXB|1|A|A|1204
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain C
- RIBOSOMAL PROTEIN S3
- Chain G
- RIBOSOMAL PROTEIN S7
- Chain J
- RIBOSOMAL PROTEIN S10
- Chain N
- RIBOSOMAL PROTEIN S14
- Chain Y
- ANTICODON STEM-LOOP OF TRANSFER RNA WITH ANTICODON ACCC
Coloring options: