IL_2UXB_077
3D structure
- PDB id
- 2UXB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA GGGU in the context of the Thermus thermophilus 30S subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GAUG*CUAAUC
- Length
- 10 nucleotides
- Bulged bases
- 2UXB|1|A|U|1257, 2UXB|1|A|U|1278, 2UXB|1|A|A|1280, 2UXB|1|A|U|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2UXB_077 not in the Motif Atlas
- Homologous match to IL_4LFB_052
- Geometric discrepancy: 0.543
- The information below is about IL_4LFB_052
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_08849.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
2UXB|1|A|G|1255
2UXB|1|A|A|1256
2UXB|1|A|U|1257
2UXB|1|A|G|1258
*
2UXB|1|A|C|1277
2UXB|1|A|U|1278
2UXB|1|A|A|1279
2UXB|1|A|A|1280
2UXB|1|A|U|1281
2UXB|1|A|C|1282
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain C
- RIBOSOMAL PROTEIN S3
- Chain J
- RIBOSOMAL PROTEIN S10
- Chain N
- RIBOSOMAL PROTEIN S14
Coloring options: