IL_2UXD_019
3D structure
- PDB id
- 2UXD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA CGGG in the context of the Thermus thermophilus 30S subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAACCC*GGCUGAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2UXD_019 not in the Motif Atlas
- Homologous match to IL_4LFB_019
- Geometric discrepancy: 0.4421
- The information below is about IL_4LFB_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31561.1
- Basepair signature
- cWW-L-R-tWH-tWH-L-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
2UXD|1|A|G|450
2UXD|1|A|A|451
2UXD|1|A|A|452
2UXD|1|A|A|453
2UXD|1|A|C|454
2UXD|1|A|C|455
2UXD|1|A|C|456
*
2UXD|1|A|G|476
2UXD|1|A|G|477
2UXD|1|A|C|479
2UXD|1|A|U|480
2UXD|1|A|G|481
2UXD|1|A|A|482
2UXD|1|A|C|483
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain G
- RIBOSOMAL PROTEIN S7
- Chain P
- RIBOSOMAL PROTEIN S16
Coloring options: