IL_2UXD_064
3D structure
- PDB id
- 2UXD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA CGGG in the context of the Thermus thermophilus 30S subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CCAGCG*CGG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2UXD_064 not in the Motif Atlas
- Homologous match to IL_4LFB_066
- Geometric discrepancy: 0.3609
- The information below is about IL_4LFB_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_66997.1
- Basepair signature
- cWW-cWS-L-R-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
2UXD|1|A|C|1128
2UXD|1|A|C|1129
2UXD|1|A|A|1130
2UXD|1|A|G|1131
2UXD|1|A|C|1132
2UXD|1|A|G|1133
*
2UXD|1|A|C|1141
2UXD|1|A|G|1142
2UXD|1|A|G|1143
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain I
- RIBOSOMAL PROTEIN S9
- Chain J
- RIBOSOMAL PROTEIN S10
Coloring options: