IL_2V3C_001

3D structure

PDB id

2V3C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the SRP54-SRP19-7S.S SRP RNA complex of M. jannaschii

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

GAG*UAAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2V3C_001 not in the Motif Atlas

Geometric match to IL_4XCO_004

Geometric discrepancy: 0.1835

The information below is about IL_4XCO_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05502.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

6

Unit IDs

2V3C|1|M|G|152
2V3C|1|M|A|153
2V3C|1|M|G|154
*
2V3C|1|M|U|175
2V3C|1|M|A|176
2V3C|1|M|A|177
2V3C|1|M|C|178

Current chains

Chain M

7S RNA

Nearby chains

Chain C

SIGNAL RECOGNITION 54 KDA PROTEIN