IL_2WWA_004
3D structure
- PDB id
- 2WWA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of idle yeast Ssh1 complex bound to the yeast 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.9 Å
Loop
- Sequence
- UCAAC*GGA
- Length
- 8 nucleotides
- Bulged bases
- 2WWA|1|F|G|1672
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2WWA_004 not in the Motif Atlas
- Geometric match to IL_7RQB_051
- Geometric discrepancy: 0.1432
- The information below is about IL_7RQB_051
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.6
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 14
Unit IDs
2WWA|1|F|U|1659
2WWA|1|F|C|1660
2WWA|1|F|A|1661
2WWA|1|F|A|1662
2WWA|1|F|C|1663
*
2WWA|1|F|G|1671
2WWA|1|F|G|1672
2WWA|1|F|A|1673
Current chains
- Chain F
- 25S RRNA
Nearby chains
- Chain E
- 25S RRNA
- Chain I
- 60S RIBOSOMAL PROTEIN L17-A
- Chain J
- 60S RIBOSOMAL PROTEIN L19
- Chain O
- 60S RIBOSOMAL PROTEIN L39
Coloring options: