IL_2WWB_004
3D structure
- PDB id
- 2WWB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE MAMMALIAN SEC61 COMPLEX BOUND TO THE ACTIVELY TRANSLATING WHEAT GERM 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.48 Å
Loop
- Sequence
- UCAAC*GGA
- Length
- 8 nucleotides
- Bulged bases
- 2WWB|1|F|G|1672
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2WWB_004 not in the Motif Atlas
- Geometric match to IL_7RQB_051
- Geometric discrepancy: 0.1445
- The information below is about IL_7RQB_051
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.6
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 14
Unit IDs
2WWB|1|F|U|1659
2WWB|1|F|C|1660
2WWB|1|F|A|1661
2WWB|1|F|A|1662
2WWB|1|F|C|1663
*
2WWB|1|F|G|1671
2WWB|1|F|G|1672
2WWB|1|F|A|1673
Current chains
- Chain F
- 25S RRNA
Nearby chains
- Chain A
- PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT ALPHA ISOFORM 1
- Chain E
- 25S RRNA
- Chain I
- 60S RIBOSOMAL PROTEIN L17-A
- Chain J
- 60S RIBOSOMAL PROTEIN L19
Coloring options: