IL_2XZM_011

3D structure

PDB id

2XZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. THIS FILE CONTAINS THE 40S SUBUNIT AND INITIATION FACTOR FOR MOLECULE 1

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

2XZM|1|A|U|164

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_82188.1

Basepair signature

cWW-tSH-L-R-R-R-R-L-L-L-cWW

Number of instances in this motif group

5

Unit IDs

2XZM|1|A|G|137
2XZM|1|A|G|138
2XZM|1|A|A|139
2XZM|1|A|U|140
2XZM|1|A|A|141
2XZM|1|A|A|142
2XZM|1|A|C|143
*
2XZM|1|A|G|159
2XZM|1|A|C|160
2XZM|1|A|U|161
2XZM|1|A|A|162
2XZM|1|A|A|163
2XZM|1|A|U|164
2XZM|1|A|A|165
2XZM|1|A|C|166

Current chains

Chain A

18S RRNA

Nearby chains

Chain P

RPS24E

Chain Y

RPS6E