3D structure

PDB id
2XZM (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. THIS FILE CONTAINS THE 40S SUBUNIT AND INITIATION FACTOR FOR MOLECULE 1
Experimental method
X-RAY DIFFRACTION
Resolution
3.93 Å

Loop

Sequence
AAGGGA*UU
Length
8 nucleotides
Bulged bases
2XZM|1|A|G|1199, 2XZM|1|A|G|1200, 2XZM|1|A|G|1201
QA status
QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_92484.1
Basepair signature
cWW-cSH-R-R-cWW
Number of instances in this motif group
5

Unit IDs

2XZM|1|A|A|1197
2XZM|1|A|A|1198
2XZM|1|A|G|1199
2XZM|1|A|G|1200
2XZM|1|A|G|1201
2XZM|1|A|A|1202
*
2XZM|1|A|U|1229
2XZM|1|A|U|1230

Current chains

Chain A
18S RRNA

Nearby chains

Chain 7
PLECTIN/S10 DOMAIN CONTAINING PROTEIN
Chain 9
RPS31E
Chain U
RIBOSOMAL PROTEIN L7AE CONTAINING PROTEIN

Coloring options:

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