3D structure

PDB id
2XZM (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. THIS FILE CONTAINS THE 40S SUBUNIT AND INITIATION FACTOR FOR MOLECULE 1
Experimental method
X-RAY DIFFRACTION
Resolution
3.93 Å

Loop

Sequence
ACA*UUU
Length
6 nucleotides
Bulged bases
None detected
QA status
QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_21304.2
Basepair signature
cWW-tHS-cWW
Number of instances in this motif group
11

Unit IDs

2XZM|1|A|A|1206
2XZM|1|A|C|1207
2XZM|1|A|A|1208
*
2XZM|1|A|U|1221
2XZM|1|A|U|1222
2XZM|1|A|U|1223

Current chains

Chain A
18S RRNA

Nearby chains

Chain 9
RPS31E
Chain N
RPS29E

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1024 s