IL_2XZM_080

3D structure

PDB id

2XZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. THIS FILE CONTAINS THE 40S SUBUNIT AND INITIATION FACTOR FOR MOLECULE 1

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

GGGAUA*UUGAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_92321.3

Basepair signature

cWW-cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

7

Unit IDs

2XZM|1|A|G|1512
2XZM|1|A|G|1513
2XZM|1|A|G|1514
2XZM|1|A|A|1515
2XZM|1|A|U|1516
2XZM|1|A|A|1517
*
2XZM|1|A|U|1538
2XZM|1|A|U|1539
2XZM|1|A|G|1540
2XZM|1|A|A|1541
2XZM|1|A|A|1542
2XZM|1|A|C|1543

Current chains

Chain A

18S RRNA

Nearby chains

Chain 8

RPS25E,

Chain M

RPS18E

Chain T

RPS19E