IL_2Y9B_007
3D structure
- PDB id
- 2Y9B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the spliceosomal U4 snRNP core domain
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- CCG*UUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11616.1
- Basepair signature
- 06_cWW-cWH-cWW
- Number of instances in this motif group
- 55
Unit IDs
2Y9B|1|Y|C|802
2Y9B|1|Y|C|803
2Y9B|1|Y|G|804
*
2Y9B|1|Y|U|825
2Y9B|1|Y|U|826
2Y9B|1|Y|G|827
Current chains
- Chain Y
- HOMO SAPIENS U4A SNRNA
Nearby chains
- Chain O
- SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEINS B AND B'
- Chain P
- SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1
- Chain R
- SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3
Coloring options: