IL_2YKR_010
3D structure
- PDB id
- 2YKR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S ribosomal subunit with RsgA bound in the presence of GMPPNP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.8 Å
Loop
- Sequence
- GAAACUGCC*GAUGUGC
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
2YKR|1|A|G|128
2YKR|1|A|A|129
2YKR|1|A|A|130
2YKR|1|A|A|131
2YKR|1|A|C|132
2YKR|1|A|U|133
2YKR|1|A|G|134
2YKR|1|A|C|135
2YKR|1|A|C|136
*
2YKR|1|A|G|227
2YKR|1|A|A|228
2YKR|1|A|U|229
2YKR|1|A|G|230
2YKR|1|A|U|231
2YKR|1|A|G|232
2YKR|1|A|C|233
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain P
- 30S RIBOSOMAL PROTEIN S16
- Chain Q
- 30S RIBOSOMAL PROTEIN S17
- Chain T
- 30S RIBOSOMAL PROTEIN S20
Coloring options: