IL_2YKR_039
3D structure
- PDB id
- 2YKR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S ribosomal subunit with RsgA bound in the presence of GMPPNP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.8 Å
Loop
- Sequence
- GUGAAAUCC*GAACUGC
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
2YKR|1|A|G|604
2YKR|1|A|U|605
2YKR|1|A|G|606
2YKR|1|A|A|607
2YKR|1|A|A|608
2YKR|1|A|A|609
2YKR|1|A|U|610
2YKR|1|A|C|611
2YKR|1|A|C|612
*
2YKR|1|A|G|628
2YKR|1|A|A|629
2YKR|1|A|A|630
2YKR|1|A|C|631
2YKR|1|A|U|632
2YKR|1|A|G|633
2YKR|1|A|C|634
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain D
- 30S RIBOSOMAL PROTEIN S4
- Chain H
- 30S RIBOSOMAL PROTEIN S8
- Chain P
- 30S RIBOSOMAL PROTEIN S16
- Chain Q
- 30S RIBOSOMAL PROTEIN S17
Coloring options: