IL_2YKR_040
3D structure
- PDB id
- 2YKR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S ribosomal subunit with RsgA bound in the presence of GMPPNP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.8 Å
Loop
- Sequence
- GAGUCU*AAGACUGAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
2YKR|1|A|G|654
2YKR|1|A|A|655
2YKR|1|A|G|656
2YKR|1|A|U|657
2YKR|1|A|C|658
2YKR|1|A|U|659
*
2YKR|1|A|A|746
2YKR|1|A|A|747
2YKR|1|A|G|748
2YKR|1|A|A|749
2YKR|1|A|C|750
2YKR|1|A|U|751
2YKR|1|A|G|752
2YKR|1|A|A|753
2YKR|1|A|C|754
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain H
- 30S RIBOSOMAL PROTEIN S8
- Chain O
- 30S RIBOSOMAL PROTEIN S15
Coloring options: