IL_2YKR_062
3D structure
- PDB id
- 2YKR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S ribosomal subunit with RsgA bound in the presence of GMPPNP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.8 Å
Loop
- Sequence
- UUUGUUGC*GAACUCAAA
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
2YKR|1|A|U|1121
2YKR|1|A|U|1122
2YKR|1|A|U|1123
2YKR|1|A|G|1124
2YKR|1|A|U|1125
2YKR|1|A|U|1126
2YKR|1|A|G|1127
2YKR|1|A|C|1128
*
2YKR|1|A|G|1144
2YKR|1|A|A|1145
2YKR|1|A|A|1146
2YKR|1|A|C|1147
2YKR|1|A|U|1148
2YKR|1|A|C|1149
2YKR|1|A|A|1150
2YKR|1|A|A|1151
2YKR|1|A|A|1152
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain I
- 30S RIBOSOMAL PROTEIN S9
- Chain J
- 30S RIBOSOMAL PROTEIN S10
Coloring options: