IL_2YKR_089

3D structure

PDB id

2YKR (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit with RsgA bound in the presence of GMPPNP

Experimental method

ELECTRON MICROSCOPY

Resolution

9.8 Å

Loop

Sequence

GGAUAACU*AGCUAAUAC

Length

17 nucleotides

Bulged bases

2YKR|1|A|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2YKR|1|A|G|147
2YKR|1|A|G|148
2YKR|1|A|A|149
2YKR|1|A|U|150
2YKR|1|A|A|151
2YKR|1|A|A|152
2YKR|1|A|C|153
2YKR|1|A|U|154
*
2YKR|1|A|A|167
2YKR|1|A|G|168
2YKR|1|A|C|169
2YKR|1|A|U|170
2YKR|1|A|A|171
2YKR|1|A|A|172
2YKR|1|A|U|173
2YKR|1|A|A|174
2YKR|1|A|C|175

Current chains

Chain A

16S RRNA

Nearby chains

Chain T

30S RIBOSOMAL PROTEIN S20