IL_2ZJR_026
3D structure
- PDB id
- 2ZJR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.91 Å
Loop
- Sequence
- CUGUAG*CGAAGG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_92321.2
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
2ZJR|1|X|C|870
2ZJR|1|X|U|871
2ZJR|1|X|G|872
2ZJR|1|X|U|873
2ZJR|1|X|A|874
2ZJR|1|X|G|875
*
2ZJR|1|X|C|927
2ZJR|1|X|G|928
2ZJR|1|X|A|929
2ZJR|1|X|A|930
2ZJR|1|X|G|931
2ZJR|1|X|G|932
Current chains
- Chain X
- ribosomal 23S RNA
Nearby chains
- Chain J
- 50S ribosomal protein L16
- Chain S
- 50S ribosomal protein L25
- Chain T
- 50S ribosomal protein L27
- Chain W
- 50S ribosomal protein L30
- Chain Y
- 5S ribosomal RNA; 5S rRNA
Coloring options: