IL_2ZJR_033

3D structure

PDB id

2ZJR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

2.91 Å

Loop

Sequence

UCCCUAAA*UA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24546.2

Basepair signature

cWW-L-L-L-cSH-L-cWW

Number of instances in this motif group

10

Unit IDs

2ZJR|1|X|U|1015
2ZJR|1|X|C|1016
2ZJR|1|X|C|1017
2ZJR|1|X|C|1018
2ZJR|1|X|U|1019
2ZJR|1|X|A|1020
2ZJR|1|X|A|1021
2ZJR|1|X|A|1022
*
2ZJR|1|X|U|1161
2ZJR|1|X|A|1162

Current chains

Chain X

ribosomal 23S RNA

Nearby chains

Chain G

50S ribosomal protein L13

Chain N

50S ribosomal protein L20