IL_2ZJR_052

3D structure

PDB id

2ZJR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

2.91 Å

Loop

Sequence

UGAUG*CUAAA

Length

10 nucleotides

Bulged bases

2ZJR|1|X|U|1434

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_93424.2

Basepair signature

cWW-tSH-R-tHW-cWW

Number of instances in this motif group

22

Unit IDs

2ZJR|1|X|U|1431
2ZJR|1|X|G|1432
2ZJR|1|X|A|1433
2ZJR|1|X|U|1434
2ZJR|1|X|G|1435
*
2ZJR|1|X|C|1593
2ZJR|1|X|U|1594
2ZJR|1|X|A|1595
2ZJR|1|X|A|1596
2ZJR|1|X|A|1597

Current chains

Chain X

ribosomal 23S RNA

Nearby chains