IL_2ZJR_064

3D structure

PDB id

2ZJR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

2.91 Å

Loop

Sequence

CGUAAC*GAAGAAG

Length

13 nucleotides

Bulged bases

2ZJR|1|X|G|1716

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_72158.2

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

2ZJR|1|X|C|1703
2ZJR|1|X|G|1704
2ZJR|1|X|U|1705
2ZJR|1|X|A|1706
2ZJR|1|X|A|1707
2ZJR|1|X|C|1708
*
2ZJR|1|X|G|1713
2ZJR|1|X|A|1714
2ZJR|1|X|A|1715
2ZJR|1|X|G|1716
2ZJR|1|X|A|1717
2ZJR|1|X|A|1718
2ZJR|1|X|G|1719

Current chains

Chain X

ribosomal 23S RNA

Nearby chains