IL_2ZJR_080
3D structure
- PDB id
- 2ZJR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.91 Å
Loop
- Sequence
- GGG*UUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2ZJR_080 not in the Motif Atlas
- Geometric match to IL_4E59_001
- Geometric discrepancy: 0.1548
- The information below is about IL_4E59_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
2ZJR|1|X|G|2076
2ZJR|1|X|G|2077
2ZJR|1|X|G|2078
*
2ZJR|1|X|U|2177
2ZJR|1|X|U|2178
2ZJR|1|X|C|2179
Current chains
- Chain X
- ribosomal 23S RNA
Nearby chains
- Chain A
- 50S ribosomal protein L2
- Chain U
- 50S ribosomal protein L28
Coloring options: